BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A05LP1|AL430634
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1872 0.0
3x_Contig66 818 0.0
>3x_Contig1530
Length = 6216
Score = 1872 bits (943), Expect = 0.0
Identities = 947/949 (99%)
Strand = Plus / Minus
Query: 1 gatcgttaattgcagccagcgacggtctacaagagacctaccaaggccgtctacgacaag 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4134 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 4075
Query: 61 gcccgcmagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4074 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 4015
Query: 121 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4014 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 3955
Query: 181 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3954 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 3895
Query: 241 tggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3894 tggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 3835
Query: 301 ttcaagggccgtcgcgggcgcaccggacccagcacaagggctgggctcttccagccataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3834 ttcaagggccgtcgcgggcgcaccggacccagcacaagggctgggctcttccagccataa 3775
Query: 361 gaccccctctccggataaaccaattccggggtgataagctgttaagaagaaaagataact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3774 gaccccctctccggataaaccaattccggggtgataagctgttaagaagaaaagataact 3715
Query: 421 cctcccagggctcgcgccgacgtctccacattcagttacgttaccgtgaagaatccatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 cctcccagggctcgcgccgacgtctccacattcagttacgttaccgtgaagaatccatat 3655
Query: 481 ccaggttccggaatattaaccggattccctttcgatggtggcctagaaaattaggccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3654 ccaggttccggaatattaaccggattccctttcgatggtggcctagaaaattaggccttt 3595
Query: 541 gaaacggagcttccccatctcttaggatcgactaacccacgtccaactgctgttgacgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 gaaacggagcttccccatctcttaggatcgactaacccacgtccaactgctgttgacgtg 3535
Query: 601 gaacctttccccacttcagtcttcaaagttctcatttgaatatttgctactaccaccaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3534 gaacctttccccacttcagtcttcaaagttctcatttgaatatttgctactaccaccaag 3475
Query: 661 atctgcactagaggccgttctacccagctttacagcctaggcttcgtcactgacctccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3474 atctgcactagaggccgttctacccagctttacagcctaggcttcgtcactgacctccac 3415
Query: 721 gcctgcctactcgtcagggcatcatattaaccctgacggtggagtataggtaacacgctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3414 gcctgcctactcgtcagggcatcatattaaccctgacggtggagtataggtaacacgctt 3355
Query: 781 gagcgccatccattttcagggctagttcattcggccggtgagttgttacacactccttag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3354 gagcgccatccattttcagggctagttcattcggccggtgagttgttacacactccttag 3295
Query: 841 cggattccgacttccatggccaccgtccggctgtctagatgaactaacaccttttgtggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3294 cggattccgacttccatggccaccgtccggctgtctagatgaactaacaccttttgtggt 3235
Query: 901 gtctgatgagcgtgtattccggcaccttaactccacgttcggttcatcc 949
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3234 gtctgatgagcgtgtattccggcaccttaactccacgttcggttcatcc 3186
>3x_Contig66
Length = 1023
Score = 818 bits (412), Expect = 0.0
Identities = 416/418 (99%)
Strand = Plus / Plus
Query: 1 gatcgttaattgcagccagcgacggtctacaagagacctaccaaggccgtctacgacaag 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 123
Query: 61 gcccgcmagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 183
Query: 121 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 243
Query: 181 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggatctattttgccgacttcccttatctacattattctatcaactagaggctgttcacct 303
Query: 241 tggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tggagacctgctgcggttatcagtacgacctggcatgaaaactattccttcctgtggatt 363
Query: 301 ttcaagggccgtcgcgggcgcaccggacccagcacaagggctgggctcttccagccataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcaagggccgtcgcgggcgcaccggacccagcacaagggctgggctcttccagccataa 423
Query: 361 gaccccctctccggataaaccaattccggggtgataagctgttaagaagaaaagataa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaccccctctccggataaaccaattccggggtgataagctgttaagaagaaaagataa 481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3589
Number of Sequences: 1807
Number of extensions: 3589
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 2
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)